Metformin and body not getting alone...HELP!!!

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Today is my second full day on metformin and my body is not taking well at all. Had my nexplon taken out Tuesday afternoon and started the meds that night. Yesterday I had yogurt which helped with the diarrhea, but today i have stuff coming from both ends!! :( how long does it take ur body to get use to these meds and what are some best practices for helping my stomach settle while taking this medication?
MD has me on 1000 mg twice a day! 
Thanks in advance